Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgb1P63158 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgb1P63158 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Hmgb1P63158 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgb1P63158 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.02■□□□□ 0.16
Hmgb1P63158 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Hmgb1P63158 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.02■□□□□ 0.16
Hmgb1P63158 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.02■□□□□ 0.16
Hmgb1P63158 Gm2451-201ENSMUST00000199447 999 ntBASIC16.02■□□□□ 0.16
Hmgb1P63158 Gm10290-201ENSMUST00000200451 999 ntBASIC16.02■□□□□ 0.16
Hmgb1P63158 Olfr286-202ENSMUST00000205305 969 ntBASIC16.02■□□□□ 0.16
Hmgb1P63158 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgb1P63158 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgb1P63158 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hmgb1P63158 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Hmgb1P63158 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Hmgb1P63158 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Gm14042-201ENSMUST00000120139 833 ntBASIC16.01■□□□□ 0.15
Hmgb1P63158 Gm13597-201ENSMUST00000121239 375 ntBASIC16.01■□□□□ 0.15
Hmgb1P63158 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Gm2651-201ENSMUST00000203560 838 ntBASIC16.01■□□□□ 0.15
Hmgb1P63158 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Hmgb1P63158 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Hmgb1P63158 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Tcf21-202ENSMUST00000218002 1788 ntBASIC16■□□□□ 0.15
Hmgb1P63158 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16■□□□□ 0.15
Hmgb1P63158 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hmgb1P63158 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Hmgb1P63158 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hmgb1P63158 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16■□□□□ 0.15
Hmgb1P63158 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hmgb1P63158 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Hmgb1P63158 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16■□□□□ 0.15
Hmgb1P63158 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16■□□□□ 0.15
Hmgb1P63158 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16■□□□□ 0.15
Hmgb1P63158 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16■□□□□ 0.15
Hmgb1P63158 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16■□□□□ 0.15
Hmgb1P63158 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Hmgb1P63158 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Hmgb1P63158 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Hmgb1P63158 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Hmgb1P63158 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Hmgb1P63158 Gm16198-201ENSMUST00000118766 670 ntBASIC15.99■□□□□ 0.15
Hmgb1P63158 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.99■□□□□ 0.15
Hmgb1P63158 Gm9182-201ENSMUST00000217829 639 ntBASIC15.99■□□□□ 0.15
Hmgb1P63158 Thap2-203ENSMUST00000218989 527 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms