Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Crnkl1P63154 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Gm27741-201ENSMUST00000185060 237 ntBASIC14.41□□□□□ -0.1
Crnkl1P63154 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.41□□□□□ -0.1
Crnkl1P63154 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.41□□□□□ -0.1
Crnkl1P63154 Birc2-201ENSMUST00000054878 378 ntBASIC14.41□□□□□ -0.1
Crnkl1P63154 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Crnkl1P63154 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.41□□□□□ -0.1
Crnkl1P63154 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Crnkl1P63154 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Crnkl1P63154 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Crnkl1P63154 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Crnkl1P63154 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Crnkl1P63154 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Crnkl1P63154 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Celf4-206ENSMUST00000224553 1729 ntBASIC14.39□□□□□ -0.11
Crnkl1P63154 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.39□□□□□ -0.11
Crnkl1P63154 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.39□□□□□ -0.11
Crnkl1P63154 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Crnkl1P63154 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Crnkl1P63154 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Crnkl1P63154 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms