Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.84□□□□□ -0.35
Sec61a1P61620 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a1P61620 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a1P61620 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.83□□□□□ -0.35
Sec61a1P61620 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.83□□□□□ -0.35
Sec61a1P61620 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sec61a1P61620 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm11779-201ENSMUST00000118541 368 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm15358-201ENSMUST00000119249 520 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm14140-201ENSMUST00000119999 995 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm12260-201ENSMUST00000122447 411 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gm19164-201ENSMUST00000210667 640 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.83□□□□□ -0.36
Sec61a1P61620 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sec61a1P61620 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sec61a1P61620 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Gm45167-201ENSMUST00000208007 322 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.82□□□□□ -0.36
Sec61a1P61620 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sec61a1P61620 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sec61a1P61620 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms