Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sssca1P56873 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sssca1P56873 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sssca1P56873 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sssca1P56873 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sssca1P56873 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.77□□□□□ -0.53
Sssca1P56873 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.77□□□□□ -0.53
Sssca1P56873 Gm7787-201ENSMUST00000216858 688 ntBASIC11.77□□□□□ -0.53
Sssca1P56873 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.77□□□□□ -0.53
Sssca1P56873 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sssca1P56873 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.77□□□□□ -0.53
Sssca1P56873 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sssca1P56873 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sssca1P56873 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.76□□□□□ -0.53
Sssca1P56873 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Gm13418-201ENSMUST00000119097 944 ntBASIC11.76□□□□□ -0.53
Sssca1P56873 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.76□□□□□ -0.53
Sssca1P56873 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.76□□□□□ -0.53
Sssca1P56873 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.76□□□□□ -0.53
Sssca1P56873 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sssca1P56873 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sssca1P56873 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sssca1P56873 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sssca1P56873 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms