Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Gm18246-201ENSMUST00000221023 728 ntBASIC13.96□□□□□ -0.17
Sox3P53784 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox3P53784 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Sox3P53784 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox3P53784 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox3P53784 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox3P53784 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Sox3P53784 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox3P53784 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Sox3P53784 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.95□□□□□ -0.18
Sox3P53784 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.95□□□□□ -0.18
Sox3P53784 Gm16198-201ENSMUST00000118766 670 ntBASIC13.95□□□□□ -0.18
Sox3P53784 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Gm38294-201ENSMUST00000192831 381 ntBASIC13.95□□□□□ -0.18
Sox3P53784 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Gm19164-201ENSMUST00000210667 640 ntBASIC13.95□□□□□ -0.18
Sox3P53784 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox3P53784 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Sox3P53784 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.95□□□□□ -0.18
Sox3P53784 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox3P53784 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox3P53784 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox3P53784 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox3P53784 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox3P53784 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Sox3P53784 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sox3P53784 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox3P53784 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.94□□□□□ -0.18
Sox3P53784 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.94□□□□□ -0.18
Sox3P53784 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Sox3P53784 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox3P53784 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.94□□□□□ -0.18
Sox3P53784 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox3P53784 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox3P53784 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.93□□□□□ -0.18
Sox3P53784 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox3P53784 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox3P53784 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 Gm12008-201ENSMUST00000117791 755 ntBASIC13.93□□□□□ -0.18
Sox3P53784 Gm6415-201ENSMUST00000118488 348 ntBASIC13.93□□□□□ -0.18
Sox3P53784 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox3P53784 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox3P53784 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms