Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pdx1P52946 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.39□□□□□ -0.11
Pdx1P52946 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdx1P52946 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdx1P52946 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.39□□□□□ -0.11
Pdx1P52946 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdx1P52946 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pdx1P52946 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.38□□□□□ -0.11
Pdx1P52946 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Pdx1P52946 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.38□□□□□ -0.11
Pdx1P52946 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Gm9182-201ENSMUST00000217829 639 ntBASIC14.38□□□□□ -0.11
Pdx1P52946 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.38□□□□□ -0.11
Pdx1P52946 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pdx1P52946 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
Pdx1P52946 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pdx1P52946 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdx1P52946 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pdx1P52946 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdx1P52946 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Pdx1P52946 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Pdx1P52946 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdx1P52946 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.37□□□□□ -0.11
Pdx1P52946 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.37□□□□□ -0.11
Pdx1P52946 Gm43125-201ENSMUST00000201724 730 ntBASIC14.37□□□□□ -0.11
Pdx1P52946 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pdx1P52946 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pdx1P52946 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdx1P52946 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdx1P52946 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Pdx1P52946 Gm12134-201ENSMUST00000122109 520 ntBASIC14.36□□□□□ -0.11
Pdx1P52946 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Gm18737-201ENSMUST00000173594 937 ntBASIC14.36□□□□□ -0.11
Pdx1P52946 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.36□□□□□ -0.11
Pdx1P52946 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.36□□□□□ -0.11
Pdx1P52946 Gm43474-201ENSMUST00000196415 774 ntBASIC14.36□□□□□ -0.11
Pdx1P52946 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Pdx1P52946 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
Pdx1P52946 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pdx1P52946 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pdx1P52946 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pdx1P52946 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms