Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.38□□□□□ -0.43
Hmga2P52927 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hmga2P52927 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hmga2P52927 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.38□□□□□ -0.43
Hmga2P52927 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.37□□□□□ -0.43
Hmga2P52927 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmga2P52927 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hmga2P52927 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.37□□□□□ -0.43
Hmga2P52927 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmga2P52927 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmga2P52927 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Hmga2P52927 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.36□□□□□ -0.43
Hmga2P52927 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.36□□□□□ -0.43
Hmga2P52927 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.36□□□□□ -0.43
Hmga2P52927 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Hmga2P52927 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Hmga2P52927 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmga2P52927 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.36□□□□□ -0.43
Hmga2P52927 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.36□□□□□ -0.43
Hmga2P52927 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.36□□□□□ -0.43
Hmga2P52927 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmga2P52927 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hmga2P52927 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.35□□□□□ -0.43
Hmga2P52927 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmga2P52927 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmga2P52927 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmga2P52927 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.35□□□□□ -0.43
Hmga2P52927 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.35□□□□□ -0.43
Hmga2P52927 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmga2P52927 Gm6089-201ENSMUST00000197666 938 ntBASIC12.35□□□□□ -0.43
Hmga2P52927 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmga2P52927 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.35□□□□□ -0.43
Hmga2P52927 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms