Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ercc3P49135 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ercc3P49135 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ercc3P49135 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ercc3P49135 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc3P49135 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc3P49135 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ercc3P49135 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc3P49135 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc3P49135 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc3P49135 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.26■□□□□ 0.35
Ercc3P49135 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Ercc3P49135 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ercc3P49135 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Gm11543-201ENSMUST00000120758 370 ntBASIC17.26■□□□□ 0.35
Ercc3P49135 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc3P49135 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ercc3P49135 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc3P49135 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.25■□□□□ 0.35
Ercc3P49135 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Gm13015-201ENSMUST00000118674 204 ntBASIC17.25■□□□□ 0.35
Ercc3P49135 Gm2810-201ENSMUST00000118681 990 ntBASIC17.25■□□□□ 0.35
Ercc3P49135 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ercc3P49135 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.25■□□□□ 0.35
Ercc3P49135 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.25■□□□□ 0.35
Ercc3P49135 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ercc3P49135 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc3P49135 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Ercc3P49135 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc3P49135 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc3P49135 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.24■□□□□ 0.35
Ercc3P49135 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.24■□□□□ 0.35
Ercc3P49135 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ercc3P49135 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Ercc3P49135 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm5779-201ENSMUST00000218467 910 ntBASIC17.24■□□□□ 0.35
Ercc3P49135 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Gm8396-201ENSMUST00000057361 823 ntBASIC17.24■□□□□ 0.35
Ercc3P49135 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc3P49135 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ercc3P49135 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ercc3P49135 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc3P49135 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms