Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
GdnfP48540 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.76□□□□□ -0.37
GdnfP48540 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GdnfP48540 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.76□□□□□ -0.37
GdnfP48540 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.76□□□□□ -0.37
GdnfP48540 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GdnfP48540 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GdnfP48540 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
GdnfP48540 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.75□□□□□ -0.37
GdnfP48540 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.75□□□□□ -0.37
GdnfP48540 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.75□□□□□ -0.37
GdnfP48540 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GdnfP48540 Gm10060-201ENSMUST00000212002 111 ntBASIC12.75□□□□□ -0.37
GdnfP48540 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.75□□□□□ -0.37
GdnfP48540 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Matn2-206ENSMUST00000228570 2798 ntBASIC12.75□□□□□ -0.37
GdnfP48540 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GdnfP48540 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GdnfP48540 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Celf4-206ENSMUST00000224553 1729 ntBASIC12.74□□□□□ -0.37
GdnfP48540 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GdnfP48540 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.74□□□□□ -0.37
GdnfP48540 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Mir5131-201ENSMUST00000175426 93 ntBASIC12.74□□□□□ -0.37
GdnfP48540 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Gm6550-201ENSMUST00000187574 993 ntBASIC12.74□□□□□ -0.37
GdnfP48540 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.74□□□□□ -0.37
GdnfP48540 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GdnfP48540 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.74□□□□□ -0.37
GdnfP48540 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.74□□□□□ -0.37
GdnfP48540 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GdnfP48540 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GdnfP48540 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms