Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Gm15920-201ENSMUST00000118998 402 ntBASIC14.22□□□□□ -0.13
Gli1P47806 Gm14057-201ENSMUST00000120631 482 ntBASIC14.22□□□□□ -0.13
Gli1P47806 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.22□□□□□ -0.13
Gli1P47806 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.22□□□□□ -0.13
Gli1P47806 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.22□□□□□ -0.13
Gli1P47806 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gli1P47806 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.22□□□□□ -0.13
Gli1P47806 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Gli1P47806 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gli1P47806 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gli1P47806 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.21□□□□□ -0.13
Gli1P47806 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Gm14701-201ENSMUST00000117156 348 ntBASIC14.21□□□□□ -0.13
Gli1P47806 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Gli1P47806 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Chchd1-203ENSMUST00000224633 557 ntBASIC14.21□□□□□ -0.13
Gli1P47806 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Gli1P47806 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Gli1P47806 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gli1P47806 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gli1P47806 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gli1P47806 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gli1P47806 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Gli1P47806 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gli1P47806 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Gli1P47806 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gli1P47806 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gli1P47806 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.2□□□□□ -0.14
Gli1P47806 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Gm10499-201ENSMUST00000174094 934 ntBASIC14.2□□□□□ -0.14
Gli1P47806 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Gm27646-201ENSMUST00000183989 110 ntBASIC14.2□□□□□ -0.14
Gli1P47806 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.2□□□□□ -0.14
Gli1P47806 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.2□□□□□ -0.14
Gli1P47806 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.2□□□□□ -0.14
Gli1P47806 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gli1P47806 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.19□□□□□ -0.14
Gli1P47806 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms