Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nkx2-6P43688 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-6P43688 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Gm15653-201ENSMUST00000119247 907 ntBASIC13.76□□□□□ -0.21
Nkx2-6P43688 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Gm45098-201ENSMUST00000207179 657 ntBASIC13.76□□□□□ -0.21
Nkx2-6P43688 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.76□□□□□ -0.21
Nkx2-6P43688 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.76□□□□□ -0.21
Nkx2-6P43688 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nkx2-6P43688 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.75□□□□□ -0.21
Nkx2-6P43688 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nkx2-6P43688 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.74□□□□□ -0.21
Nkx2-6P43688 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Gm7730-201ENSMUST00000212486 454 ntBASIC13.74□□□□□ -0.21
Nkx2-6P43688 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.74□□□□□ -0.21
Nkx2-6P43688 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-6P43688 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Gm7488-201ENSMUST00000117148 684 ntBASIC13.73□□□□□ -0.21
Nkx2-6P43688 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-6P43688 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms