Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44357-201ENSMUST00000195897 142 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm19658-201ENSMUST00000196231 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44367-201ENSMUST00000196836 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44350-201ENSMUST00000197197 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44390-201ENSMUST00000197533 144 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44313-201ENSMUST00000198018 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44486-201ENSMUST00000198508 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44314-201ENSMUST00000199263 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44394-201ENSMUST00000199558 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44484-201ENSMUST00000199873 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44466-201ENSMUST00000200264 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44359-201ENSMUST00000200671 138 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.03□□□□□ -0.48
Hist1h1aP43275 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Hist1h1aP43275 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h1aP43275 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Ank2-226ENSMUST00000189368 339 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Gm43347-201ENSMUST00000200226 580 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.02□□□□□ -0.49
Hist1h1aP43275 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h1aP43275 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.01□□□□□ -0.49
Hist1h1aP43275 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.01□□□□□ -0.49
Hist1h1aP43275 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms