Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Mmp9P41245 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.24□□□□□ -0.45
Mmp9P41245 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.23□□□□□ -0.45
Mmp9P41245 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.23□□□□□ -0.45
Mmp9P41245 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.23□□□□□ -0.45
Mmp9P41245 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm18206-201ENSMUST00000207027 926 ntBASIC12.23□□□□□ -0.45
Mmp9P41245 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Mmp9P41245 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Mmp9P41245 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Mmp9P41245 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Grk6-205ENSMUST00000224653 2976 ntBASIC12.23□□□□□ -0.45
Mmp9P41245 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Mmp9P41245 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.22□□□□□ -0.45
Mmp9P41245 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Mmp9P41245 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.22□□□□□ -0.45
Mmp9P41245 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.22□□□□□ -0.45
Mmp9P41245 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Mmp9P41245 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.22□□□□□ -0.45
Mmp9P41245 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Mmp9P41245 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Mmp9P41245 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp9P41245 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.21□□□□□ -0.45
Mmp9P41245 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.21□□□□□ -0.45
Mmp9P41245 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp9P41245 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp9P41245 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp9P41245 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp9P41245 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.21□□□□□ -0.45
Mmp9P41245 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms