Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.66□□□□□ -0.06
Fen1P39749 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.66□□□□□ -0.06
Fen1P39749 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.66□□□□□ -0.06
Fen1P39749 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fen1P39749 Gm27646-201ENSMUST00000183989 110 ntBASIC14.66□□□□□ -0.06
Fen1P39749 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Gm28659-201ENSMUST00000188013 759 ntBASIC14.66□□□□□ -0.06
Fen1P39749 Gm43767-201ENSMUST00000198933 381 ntBASIC14.66□□□□□ -0.06
Fen1P39749 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.66□□□□□ -0.06
Fen1P39749 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.66□□□□□ -0.06
Fen1P39749 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Fen1P39749 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.66□□□□□ -0.06
Fen1P39749 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.66□□□□□ -0.06
Fen1P39749 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Fen1P39749 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.66□□□□□ -0.06
Fen1P39749 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fen1P39749 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.66□□□□□ -0.06
Fen1P39749 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Fen1P39749 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Fen1P39749 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Fen1P39749 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Fen1P39749 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Fen1P39749 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Fen1P39749 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Gm12644-201ENSMUST00000119935 606 ntBASIC14.65□□□□□ -0.06
Fen1P39749 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.65□□□□□ -0.06
Fen1P39749 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.65□□□□□ -0.06
Fen1P39749 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.65□□□□□ -0.06
Fen1P39749 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.65□□□□□ -0.06
Fen1P39749 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fen1P39749 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.64□□□□□ -0.07
Fen1P39749 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Gm44771-201ENSMUST00000206975 626 ntBASIC14.64□□□□□ -0.07
Fen1P39749 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Fen1P39749 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Fen1P39749 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.64□□□□□ -0.07
Fen1P39749 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Fen1P39749 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fen1P39749 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.64□□□□□ -0.07
Fen1P39749 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fen1P39749 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Fen1P39749 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.63□□□□□ -0.07
Fen1P39749 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Fen1P39749 Gm12895-201ENSMUST00000122214 226 ntBASIC14.63□□□□□ -0.07
Fen1P39749 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Fen1P39749 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms