Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HmgclP38060 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.33□□□□□ -0.11
HmgclP38060 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Gm10275-202ENSMUST00000168697 495 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Gm18889-201ENSMUST00000174284 929 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Gm27397-201ENSMUST00000184997 107 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Gm38225-201ENSMUST00000194001 393 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Gm2756-201ENSMUST00000195851 400 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Gm10275-201ENSMUST00000092620 635 ntBASIC14.33□□□□□ -0.12
HmgclP38060 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
HmgclP38060 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.33□□□□□ -0.12
HmgclP38060 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HmgclP38060 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HmgclP38060 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HmgclP38060 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.32□□□□□ -0.12
HmgclP38060 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HmgclP38060 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HmgclP38060 Gm2213-201ENSMUST00000197485 688 ntBASIC14.32□□□□□ -0.12
HmgclP38060 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.32□□□□□ -0.12
HmgclP38060 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.32□□□□□ -0.12
HmgclP38060 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HmgclP38060 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
HmgclP38060 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HmgclP38060 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.31□□□□□ -0.12
HmgclP38060 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.31□□□□□ -0.12
HmgclP38060 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HmgclP38060 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HmgclP38060 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HmgclP38060 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.3□□□□□ -0.12
HmgclP38060 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
HmgclP38060 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HmgclP38060 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HmgclP38060 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.3□□□□□ -0.12
HmgclP38060 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.3□□□□□ -0.12
HmgclP38060 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.3□□□□□ -0.12
HmgclP38060 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HmgclP38060 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.3□□□□□ -0.12
HmgclP38060 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HmgclP38060 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms