Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.39□□□□□ -0.27
Sftpa1P35242 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.39□□□□□ -0.27
Sftpa1P35242 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Sftpa1P35242 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.39□□□□□ -0.27
Sftpa1P35242 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.38□□□□□ -0.27
Sftpa1P35242 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gm28911-201ENSMUST00000188837 117 ntBASIC13.38□□□□□ -0.27
Sftpa1P35242 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sftpa1P35242 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.38□□□□□ -0.27
Sftpa1P35242 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sftpa1P35242 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm12341-201ENSMUST00000119724 503 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Mir1982-201ENSMUST00000157368 74 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm27701-201ENSMUST00000184498 110 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.37□□□□□ -0.27
Sftpa1P35242 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Sftpa1P35242 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sftpa1P35242 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.37□□□□□ -0.27
Sftpa1P35242 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.36□□□□□ -0.27
Sftpa1P35242 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sftpa1P35242 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms