Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.53□□□□□ -0.4
Slc6a1P31648 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Gm34391-201ENSMUST00000203706 907 ntBASIC12.53□□□□□ -0.4
Slc6a1P31648 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.53□□□□□ -0.4
Slc6a1P31648 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.53□□□□□ -0.4
Slc6a1P31648 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slc6a1P31648 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slc6a1P31648 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.52□□□□□ -0.41
Slc6a1P31648 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.52□□□□□ -0.41
Slc6a1P31648 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Gm18195-201ENSMUST00000207604 706 ntBASIC12.52□□□□□ -0.41
Slc6a1P31648 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.52□□□□□ -0.41
Slc6a1P31648 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.52□□□□□ -0.41
Slc6a1P31648 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.52□□□□□ -0.41
Slc6a1P31648 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a1P31648 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a1P31648 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slc6a1P31648 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.52□□□□□ -0.41
Slc6a1P31648 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slc6a1P31648 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a1P31648 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a1P31648 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Slc6a1P31648 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slc6a1P31648 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.5□□□□□ -0.41
Slc6a1P31648 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms