Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.84□□□□□ -0.35
Cd28P31041 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Cd28P31041 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cd28P31041 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd28P31041 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd28P31041 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Cd28P31041 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cd28P31041 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd28P31041 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cd28P31041 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cd28P31041 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.83□□□□□ -0.36
Cd28P31041 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cd28P31041 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cd28P31041 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cd28P31041 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cd28P31041 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.82□□□□□ -0.36
Cd28P31041 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.82□□□□□ -0.36
Cd28P31041 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Gm10252-201ENSMUST00000209541 832 ntBASIC12.82□□□□□ -0.36
Cd28P31041 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.82□□□□□ -0.36
Cd28P31041 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Cd28P31041 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cd28P31041 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cd28P31041 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cd28P31041 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cd28P31041 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cd28P31041 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cd28P31041 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cd28P31041 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cd28P31041 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cd28P31041 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.81□□□□□ -0.36
Cd28P31041 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cd28P31041 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.81□□□□□ -0.36
Cd28P31041 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms