Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC22.64■■□□□ 1.21
RXRBP28702 DUTP2-201ENST00000519164 463 ntBASIC22.64■■□□□ 1.21
RXRBP28702 MFF-223ENST00000524634 647 ntTSL 2 BASIC22.64■■□□□ 1.21
RXRBP28702 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC22.64■■□□□ 1.21
RXRBP28702 RHOQP1-201ENST00000555758 579 ntBASIC22.64■■□□□ 1.21
RXRBP28702 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC22.64■■□□□ 1.21
RXRBP28702 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
RXRBP28702 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RXRBP28702 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.63■■□□□ 1.21
RXRBP28702 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.63■■□□□ 1.21
RXRBP28702 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC22.63■■□□□ 1.21
RXRBP28702 TMEM14DP-201ENST00000422205 345 ntBASIC22.63■■□□□ 1.21
RXRBP28702 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC22.63■■□□□ 1.21
RXRBP28702 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22.63■■□□□ 1.21
RXRBP28702 RARRES2P9-201ENST00000565168 469 ntBASIC22.63■■□□□ 1.21
RXRBP28702 AC008735.3-201ENST00000596646 500 ntBASIC22.63■■□□□ 1.21
RXRBP28702 TEX28P1-201ENST00000613479 1221 ntBASIC22.63■■□□□ 1.21
RXRBP28702 TEX28P2-201ENST00000617764 1221 ntBASIC22.63■■□□□ 1.21
RXRBP28702 AC007431.3-201ENST00000623221 587 ntBASIC22.63■■□□□ 1.21
RXRBP28702 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RXRBP28702 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.62■■□□□ 1.21
RXRBP28702 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.62■■□□□ 1.21
RXRBP28702 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.62■■□□□ 1.21
RXRBP28702 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.62■■□□□ 1.21
RXRBP28702 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RXRBP28702 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC22.62■■□□□ 1.21
RXRBP28702 AC104989.1-201ENST00000519711 778 ntBASIC22.62■■□□□ 1.21
RXRBP28702 AL583810.1-201ENST00000553344 1045 ntBASIC22.62■■□□□ 1.21
RXRBP28702 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC22.62■■□□□ 1.21
RXRBP28702 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC22.62■■□□□ 1.21
RXRBP28702 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC22.62■■□□□ 1.21
RXRBP28702 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC22.62■■□□□ 1.21
RXRBP28702 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC22.62■■□□□ 1.21
RXRBP28702 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC22.62■■□□□ 1.21
RXRBP28702 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RXRBP28702 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RXRBP28702 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RXRBP28702 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.61■■□□□ 1.21
RXRBP28702 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.61■■□□□ 1.21
RXRBP28702 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RXRBP28702 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.61■■□□□ 1.21
RXRBP28702 AC093004.1-201ENST00000508850 424 ntBASIC22.61■■□□□ 1.21
RXRBP28702 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC22.61■■□□□ 1.21
RXRBP28702 NEU3-203ENST00000529024 581 ntTSL 3 BASIC22.61■■□□□ 1.21
RXRBP28702 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC22.61■■□□□ 1.21
RXRBP28702 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RXRBP28702 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
RXRBP28702 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.61■■□□□ 1.21
RXRBP28702 AL139099.5-201ENST00000635274 300 ntBASIC22.61■■□□□ 1.21
RXRBP28702 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RXRBP28702 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RXRBP28702 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RXRBP28702 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RXRBP28702 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
RXRBP28702 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RXRBP28702 OSM-203ENST00000403463 464 ntTSL 3 BASIC22.6■■□□□ 1.21
RXRBP28702 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC22.6■■□□□ 1.21
RXRBP28702 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.6■■□□□ 1.21
RXRBP28702 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.6■■□□□ 1.21
RXRBP28702 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RXRBP28702 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.6■■□□□ 1.21
RXRBP28702 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RXRBP28702 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RXRBP28702 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RXRBP28702 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.59■■□□□ 1.21
RXRBP28702 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RXRBP28702 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms