Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cd40P27512 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cd40P27512 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.15□□□□□ -0.3
Cd40P27512 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Gm10275-202ENSMUST00000168697 495 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cd40P27512 Gm10275-201ENSMUST00000092620 635 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cd40P27512 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.15□□□□□ -0.3
Cd40P27512 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cd40P27512 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.15□□□□□ -0.31
Cd40P27512 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd40P27512 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd40P27512 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cd40P27512 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.14□□□□□ -0.31
Cd40P27512 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.14□□□□□ -0.31
Cd40P27512 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cd40P27512 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.14□□□□□ -0.31
Cd40P27512 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Cd40P27512 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.14□□□□□ -0.31
Cd40P27512 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.14□□□□□ -0.31
Cd40P27512 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.14□□□□□ -0.31
Cd40P27512 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.14□□□□□ -0.31
Cd40P27512 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cd40P27512 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.14□□□□□ -0.31
Cd40P27512 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cd40P27512 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Cd40P27512 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.13□□□□□ -0.31
Cd40P27512 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.13□□□□□ -0.31
Cd40P27512 Gm9824-201ENSMUST00000178707 561 ntBASIC13.13□□□□□ -0.31
Cd40P27512 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.13□□□□□ -0.31
Cd40P27512 Gm43474-201ENSMUST00000196415 774 ntBASIC13.13□□□□□ -0.31
Cd40P27512 Gm18049-201ENSMUST00000208909 581 ntBASIC13.13□□□□□ -0.31
Cd40P27512 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cd40P27512 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cd40P27512 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cd40P27512 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms