Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.15□□□□□ -0.46
Col8a2P25318 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm15693-201ENSMUST00000120470 637 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm44872-201ENSMUST00000207864 420 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Gm18049-201ENSMUST00000208909 581 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.15□□□□□ -0.46
Col8a2P25318 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.15□□□□□ -0.46
Col8a2P25318 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.15□□□□□ -0.46
Col8a2P25318 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col8a2P25318 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col8a2P25318 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col8a2P25318 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col8a2P25318 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.14□□□□□ -0.47
Col8a2P25318 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col8a2P25318 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.14□□□□□ -0.47
Col8a2P25318 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col8a2P25318 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col8a2P25318 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.14□□□□□ -0.47
Col8a2P25318 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col8a2P25318 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Col8a2P25318 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.13□□□□□ -0.47
Col8a2P25318 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
Col8a2P25318 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.13□□□□□ -0.47
Col8a2P25318 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col8a2P25318 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col8a2P25318 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms