Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Gm19164-201ENSMUST00000210667 640 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Gm18246-201ENSMUST00000221023 728 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfrsf9P20334 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm24158-201ENSMUST00000175263 71 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm27437-201ENSMUST00000183429 107 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm5779-201ENSMUST00000218467 910 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tnfrsf9P20334 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tnfrsf9P20334 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms