Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Gm6973-201ENSMUST00000117080 721 ntBASIC13.82□□□□□ -0.2
Msx1P13297 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Msx1P13297 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Msx1P13297 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Gm18737-201ENSMUST00000173594 937 ntBASIC13.82□□□□□ -0.2
Msx1P13297 Mir7684-201ENSMUST00000183858 60 ntBASIC13.82□□□□□ -0.2
Msx1P13297 Gm17837-201ENSMUST00000186435 985 ntBASIC13.82□□□□□ -0.2
Msx1P13297 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.82□□□□□ -0.2
Msx1P13297 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx1P13297 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx1P13297 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Msx1P13297 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Msx1P13297 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Gm6415-201ENSMUST00000118488 348 ntBASIC13.81□□□□□ -0.2
Msx1P13297 Gm23958-201ENSMUST00000157207 105 ntBASIC13.81□□□□□ -0.2
Msx1P13297 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Gm5244-202ENSMUST00000189517 743 ntBASIC13.81□□□□□ -0.2
Msx1P13297 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.81□□□□□ -0.2
Msx1P13297 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.81□□□□□ -0.2
Msx1P13297 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Msx1P13297 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx1P13297 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Gm13453-201ENSMUST00000118708 357 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Msx1P13297 Gm9824-201ENSMUST00000178707 561 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Gm27989-201ENSMUST00000184721 107 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 AC114573.1-201ENSMUST00000224120 1210 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.8□□□□□ -0.2
Msx1P13297 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.8□□□□□ -0.2
Msx1P13297 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx1P13297 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx1P13297 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms