Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ctla2aP12399 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ctla2aP12399 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.11□□□□□ -0.31
Ctla2aP12399 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.11□□□□□ -0.31
Ctla2aP12399 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ctla2aP12399 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Gm8344-201ENSMUST00000119813 856 ntBASIC13.1□□□□□ -0.31
Ctla2aP12399 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.1□□□□□ -0.31
Ctla2aP12399 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.1□□□□□ -0.31
Ctla2aP12399 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ctla2aP12399 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ctla2aP12399 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Mir770-201ENSMUST00000103252 94 ntBASIC13.09□□□□□ -0.31
Ctla2aP12399 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ctla2aP12399 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ctla2aP12399 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.09□□□□□ -0.31
Ctla2aP12399 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ctla2aP12399 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ctla2aP12399 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ctla2aP12399 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Ctla2aP12399 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Ctla2aP12399 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ctla2aP12399 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.08□□□□□ -0.31
Ctla2aP12399 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ctla2aP12399 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ctla2aP12399 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.08□□□□□ -0.31
Ctla2aP12399 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Ctla2aP12399 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ctla2aP12399 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ctla2aP12399 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ctla2aP12399 Gm6433-201ENSMUST00000118634 875 ntBASIC13.08□□□□□ -0.32
Ctla2aP12399 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ctla2aP12399 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms