Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl3P10855 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl3P10855 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccl3P10855 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccl3P10855 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccl3P10855 Gm15824-201ENSMUST00000119516 955 ntBASIC12.79□□□□□ -0.36
Ccl3P10855 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccl3P10855 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.79□□□□□ -0.36
Ccl3P10855 Gm6266-201ENSMUST00000203844 806 ntBASIC12.79□□□□□ -0.36
Ccl3P10855 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccl3P10855 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.79□□□□□ -0.36
Ccl3P10855 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl3P10855 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.79□□□□□ -0.36
Ccl3P10855 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl3P10855 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl3P10855 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.78□□□□□ -0.36
Ccl3P10855 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccl3P10855 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.78□□□□□ -0.36
Ccl3P10855 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Gm9002-201ENSMUST00000178437 499 ntBASIC12.78□□□□□ -0.36
Ccl3P10855 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccl3P10855 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccl3P10855 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl3P10855 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl3P10855 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ccl3P10855 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl3P10855 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl3P10855 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl3P10855 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl3P10855 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl3P10855 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccl3P10855 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl3P10855 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms