Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Rpph1-201ENSMUST00000175096 319 ntBASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp6P0C0A3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp6P0C0A3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp6P0C0A3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.82■□□□□ 0.12
Chmp6P0C0A3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms