Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.8□□□□□ -0.36
P04224 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.8□□□□□ -0.36
P04224 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
P04224 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.8□□□□□ -0.36
P04224 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
P04224 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P04224 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04224 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
P04224 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 AA414768-201ENSMUST00000121924 1257 ntBASIC12.79□□□□□ -0.36
P04224 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.79□□□□□ -0.36
P04224 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
P04224 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.79□□□□□ -0.36
P04224 Gm19164-201ENSMUST00000210667 640 ntBASIC12.79□□□□□ -0.36
P04224 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
P04224 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.79□□□□□ -0.36
P04224 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04224 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.78□□□□□ -0.36
P04224 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Gm14722-201ENSMUST00000118943 689 ntBASIC12.78□□□□□ -0.36
P04224 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.78□□□□□ -0.36
P04224 Mir3081-201ENSMUST00000175305 84 ntBASIC12.78□□□□□ -0.36
P04224 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.78□□□□□ -0.36
P04224 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.78□□□□□ -0.36
P04224 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.78□□□□□ -0.36
P04224 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.78□□□□□ -0.36
P04224 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.78□□□□□ -0.36
P04224 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.78□□□□□ -0.36
P04224 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
P04224 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04224 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
P04224 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.78□□□□□ -0.36
P04224 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04224 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04224 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04224 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04224 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
P04224 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.77□□□□□ -0.36
P04224 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04224 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04224 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04224 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.77□□□□□ -0.36
P04224 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04224 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
P04224 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.77□□□□□ -0.37
P04224 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.77□□□□□ -0.37
P04224 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.77□□□□□ -0.37
P04224 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.77□□□□□ -0.37
P04224 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.77□□□□□ -0.37
P04224 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
P04224 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04224 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
P04224 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms