Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Krt1P04104 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt1P04104 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt1P04104 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Krt1P04104 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Krt1P04104 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Krt1P04104 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Krt1P04104 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.75□□□□□ -0.21
Krt1P04104 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Krt1P04104 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Krt1P04104 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.75□□□□□ -0.21
Krt1P04104 Gm18622-201ENSMUST00000219361 595 ntBASIC13.75□□□□□ -0.21
Krt1P04104 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Krt1P04104 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Krt1P04104 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Krt1P04104 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.74□□□□□ -0.21
Krt1P04104 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Krt1P04104 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.74□□□□□ -0.21
Krt1P04104 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Krt1P04104 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Krt1P04104 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.74□□□□□ -0.21
Krt1P04104 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Krt1P04104 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Krt1P04104 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Krt1P04104 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Krt1P04104 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Krt1P04104 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Gm13559-201ENSMUST00000120476 863 ntBASIC13.73□□□□□ -0.21
Krt1P04104 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.73□□□□□ -0.21
Krt1P04104 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.73□□□□□ -0.21
Krt1P04104 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Krt1P04104 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krt1P04104 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Krt1P04104 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt1P04104 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt1P04104 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krt1P04104 Gm22697-201ENSMUST00000175194 63 ntBASIC13.72□□□□□ -0.21
Krt1P04104 Gm29257-201ENSMUST00000186115 639 ntBASIC13.72□□□□□ -0.21
Krt1P04104 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.72□□□□□ -0.21
Krt1P04104 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt1P04104 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krt1P04104 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms