Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.92□□□□□ -0.02
Syn1O88935 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 AA619741-201ENSMUST00000195095 646 ntBASIC14.92□□□□□ -0.02
Syn1O88935 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Syn1O88935 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Syn1O88935 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.91□□□□□ -0.02
Syn1O88935 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Syn1O88935 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Syn1O88935 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Gm27486-201ENSMUST00000184923 80 ntBASIC14.91□□□□□ -0.02
Syn1O88935 Mir7654-201ENSMUST00000185082 70 ntBASIC14.91□□□□□ -0.02
Syn1O88935 Gm27731-201ENSMUST00000185192 107 ntBASIC14.91□□□□□ -0.02
Syn1O88935 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.91□□□□□ -0.02
Syn1O88935 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.91□□□□□ -0.02
Syn1O88935 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Syn1O88935 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.91□□□□□ -0.02
Syn1O88935 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syn1O88935 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Syn1O88935 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Syn1O88935 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
Syn1O88935 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.9□□□□□ -0.02
Syn1O88935 Gm27243-201ENSMUST00000183964 521 ntBASIC14.9□□□□□ -0.02
Syn1O88935 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.9□□□□□ -0.02
Syn1O88935 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.9□□□□□ -0.02
Syn1O88935 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Syn1O88935 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Syn1O88935 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Syn1O88935 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syn1O88935 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.89□□□□□ -0.03
Syn1O88935 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Syn1O88935 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syn1O88935 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms