Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.93□□□□□ -0.18
Hcn3O88705 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.93□□□□□ -0.18
Hcn3O88705 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hcn3O88705 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hcn3O88705 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hcn3O88705 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hcn3O88705 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.92□□□□□ -0.18
Hcn3O88705 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.92□□□□□ -0.18
Hcn3O88705 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm8097-201ENSMUST00000117903 829 ntBASIC13.92□□□□□ -0.18
Hcn3O88705 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.92□□□□□ -0.18
Hcn3O88705 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.92□□□□□ -0.18
Hcn3O88705 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.92□□□□□ -0.18
Hcn3O88705 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Hcn3O88705 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.92□□□□□ -0.18
Hcn3O88705 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.92□□□□□ -0.18
Hcn3O88705 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.92□□□□□ -0.18
Hcn3O88705 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hcn3O88705 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
Hcn3O88705 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.91□□□□□ -0.18
Hcn3O88705 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hcn3O88705 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms