Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Cops6O88545 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Gm12585-201ENSMUST00000117307 290 ntBASIC17.7■□□□□ 0.42
Cops6O88545 Gm23984-201ENSMUST00000157139 203 ntBASIC17.7■□□□□ 0.42
Cops6O88545 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Cops6O88545 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.7■□□□□ 0.42
Cops6O88545 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.7■□□□□ 0.42
Cops6O88545 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cops6O88545 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Gm6180-201ENSMUST00000065243 498 ntBASIC17.7■□□□□ 0.42
Cops6O88545 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cops6O88545 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cops6O88545 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.7■□□□□ 0.42
Cops6O88545 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.69■□□□□ 0.42
Cops6O88545 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.69■□□□□ 0.42
Cops6O88545 Gm28631-201ENSMUST00000190740 334 ntBASIC17.69■□□□□ 0.42
Cops6O88545 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cops6O88545 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.69■□□□□ 0.42
Cops6O88545 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.69■□□□□ 0.42
Cops6O88545 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.69■□□□□ 0.42
Cops6O88545 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cops6O88545 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops6O88545 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cops6O88545 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cops6O88545 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cops6O88545 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cops6O88545 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Gm15393-201ENSMUST00000120499 219 ntBASIC17.68■□□□□ 0.42
Cops6O88545 Gm12882-201ENSMUST00000121696 517 ntBASIC17.68■□□□□ 0.42
Cops6O88545 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Gm28760-201ENSMUST00000185995 736 ntBASIC17.68■□□□□ 0.42
Cops6O88545 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.68■□□□□ 0.42
Cops6O88545 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Gm6745-201ENSMUST00000199216 526 ntBASIC17.68■□□□□ 0.42
Cops6O88545 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.68■□□□□ 0.42
Cops6O88545 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.68■□□□□ 0.42
Cops6O88545 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops6O88545 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Cops6O88545 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.67■□□□□ 0.42
Cops6O88545 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Gm6912-201ENSMUST00000117218 544 ntBASIC17.67■□□□□ 0.42
Cops6O88545 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.67■□□□□ 0.42
Cops6O88545 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cops6O88545 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cops6O88545 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops6O88545 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms