Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a1O88207 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.95□□□□□ -0.34
Col5a1O88207 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.95□□□□□ -0.34
Col5a1O88207 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.95□□□□□ -0.34
Col5a1O88207 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a1O88207 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.95□□□□□ -0.34
Col5a1O88207 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.95□□□□□ -0.34
Col5a1O88207 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.95□□□□□ -0.34
Col5a1O88207 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a1O88207 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a1O88207 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col5a1O88207 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.94□□□□□ -0.34
Col5a1O88207 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Col5a1O88207 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.94□□□□□ -0.34
Col5a1O88207 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Gm27731-201ENSMUST00000185192 107 ntBASIC12.94□□□□□ -0.34
Col5a1O88207 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col5a1O88207 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col5a1O88207 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Gm15236-201ENSMUST00000117309 379 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Gm27243-201ENSMUST00000183964 521 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col5a1O88207 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.93□□□□□ -0.34
Col5a1O88207 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col5a1O88207 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.93□□□□□ -0.34
Col5a1O88207 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.92□□□□□ -0.34
Col5a1O88207 Gm2495-201ENSMUST00000191160 466 ntBASIC12.92□□□□□ -0.34
Col5a1O88207 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Col5a1O88207 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Col5a1O88207 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col5a1O88207 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Col5a1O88207 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Col5a1O88207 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.92□□□□□ -0.34
Col5a1O88207 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col5a1O88207 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col5a1O88207 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col5a1O88207 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Gm12882-201ENSMUST00000121696 517 ntBASIC12.92□□□□□ -0.34
Col5a1O88207 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.92□□□□□ -0.34
Col5a1O88207 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.92□□□□□ -0.34
Col5a1O88207 Gm8463-201ENSMUST00000208573 613 ntBASIC12.92□□□□□ -0.34
Col5a1O88207 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col5a1O88207 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.92□□□□□ -0.34
Col5a1O88207 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a1O88207 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms