Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Gm14719-201ENSMUST00000121891 340 ntBASIC12.29□□□□□ -0.44
Cxcl13O55038 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.29□□□□□ -0.44
Cxcl13O55038 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.29□□□□□ -0.44
Cxcl13O55038 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.29□□□□□ -0.44
Cxcl13O55038 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl13O55038 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl13O55038 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 AA619741-201ENSMUST00000195095 646 ntBASIC12.28□□□□□ -0.44
Cxcl13O55038 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.28□□□□□ -0.44
Cxcl13O55038 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Mir125a-201ENSMUST00000083545 68 ntBASIC12.28□□□□□ -0.44
Cxcl13O55038 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cxcl13O55038 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cxcl13O55038 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Cxcl13O55038 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl13O55038 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl13O55038 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl13O55038 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Cxcl13O55038 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.27□□□□□ -0.44
Cxcl13O55038 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.27□□□□□ -0.44
Cxcl13O55038 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl13O55038 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cxcl13O55038 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm10275-202ENSMUST00000168697 495 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl13O55038 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm2423-201ENSMUST00000074863 733 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm10275-201ENSMUST00000092620 635 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.27□□□□□ -0.45
Cxcl13O55038 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.27□□□□□ -0.45
Cxcl13O55038 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cxcl13O55038 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl13O55038 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl13O55038 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl13O55038 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl13O55038 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cxcl13O55038 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms