Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smarce1O54941 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Smarce1O54941 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Gm11452-201ENSMUST00000122376 690 ntBASIC17.3■□□□□ 0.36
Smarce1O54941 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.3■□□□□ 0.36
Smarce1O54941 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarce1O54941 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.3■□□□□ 0.36
Smarce1O54941 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.3■□□□□ 0.36
Smarce1O54941 Olfr286-202ENSMUST00000205305 969 ntBASIC17.3■□□□□ 0.36
Smarce1O54941 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.3■□□□□ 0.36
Smarce1O54941 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Smarce1O54941 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smarce1O54941 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Smarce1O54941 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.29■□□□□ 0.36
Smarce1O54941 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.29■□□□□ 0.36
Smarce1O54941 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.29■□□□□ 0.36
Smarce1O54941 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smarce1O54941 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarce1O54941 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarce1O54941 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.28■□□□□ 0.36
Smarce1O54941 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.28■□□□□ 0.36
Smarce1O54941 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smarce1O54941 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smarce1O54941 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Smarce1O54941 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.27■□□□□ 0.36
Smarce1O54941 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.27■□□□□ 0.36
Smarce1O54941 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.27■□□□□ 0.36
Smarce1O54941 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smarce1O54941 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Gm27300-201ENSMUST00000184085 97 ntBASIC17.27■□□□□ 0.36
Smarce1O54941 Gm27335-201ENSMUST00000184758 97 ntBASIC17.27■□□□□ 0.36
Smarce1O54941 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.27■□□□□ 0.36
Smarce1O54941 Gm9182-201ENSMUST00000217829 639 ntBASIC17.27■□□□□ 0.36
Smarce1O54941 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Smarce1O54941 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smarce1O54941 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms