Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Per1O35973 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Per1O35973 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Per1O35973 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.73■□□□□ 0.11
Per1O35973 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.73■□□□□ 0.11
Per1O35973 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Per1O35973 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Per1O35973 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Per1O35973 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.72■□□□□ 0.11
Per1O35973 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.72■□□□□ 0.11
Per1O35973 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.72■□□□□ 0.11
Per1O35973 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.72■□□□□ 0.11
Per1O35973 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Per1O35973 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.72■□□□□ 0.11
Per1O35973 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.72■□□□□ 0.11
Per1O35973 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Per1O35973 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
Per1O35973 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Per1O35973 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Per1O35973 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.71■□□□□ 0.11
Per1O35973 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Per1O35973 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.71■□□□□ 0.11
Per1O35973 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Gm3436-201ENSMUST00000179930 840 ntBASIC15.71■□□□□ 0.11
Per1O35973 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.71■□□□□ 0.11
Per1O35973 Gm6916-202ENSMUST00000205523 195 ntBASIC15.71■□□□□ 0.11
Per1O35973 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Per1O35973 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Per1O35973 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Per1O35973 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Per1O35973 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Per1O35973 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Per1O35973 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.7■□□□□ 0.1
Per1O35973 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Per1O35973 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.7■□□□□ 0.1
Per1O35973 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Per1O35973 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Per1O35973 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.7■□□□□ 0.1
Per1O35973 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.7■□□□□ 0.1
Per1O35973 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Per1O35973 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Per1O35973 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per1O35973 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Per1O35973 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.69■□□□□ 0.1
Per1O35973 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms