Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.51□□□□□ -0.57
Efnb3O35393 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Gm27646-201ENSMUST00000183989 110 ntBASIC11.51□□□□□ -0.57
Efnb3O35393 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.51□□□□□ -0.57
Efnb3O35393 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.51□□□□□ -0.57
Efnb3O35393 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.51□□□□□ -0.57
Efnb3O35393 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Efnb3O35393 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.51□□□□□ -0.57
Efnb3O35393 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.51□□□□□ -0.57
Efnb3O35393 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Efnb3O35393 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.5□□□□□ -0.57
Efnb3O35393 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Efnb3O35393 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.5□□□□□ -0.57
Efnb3O35393 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.5□□□□□ -0.57
Efnb3O35393 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.5□□□□□ -0.57
Efnb3O35393 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Efnb3O35393 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.5□□□□□ -0.57
Efnb3O35393 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.5□□□□□ -0.57
Efnb3O35393 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Efnb3O35393 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Efnb3O35393 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.49□□□□□ -0.57
Efnb3O35393 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Efnb3O35393 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Gm27459-201ENSMUST00000184860 107 ntBASIC11.49□□□□□ -0.57
Efnb3O35393 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Efnb3O35393 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.49□□□□□ -0.57
Efnb3O35393 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.49□□□□□ -0.57
Efnb3O35393 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.49□□□□□ -0.57
Efnb3O35393 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Efnb3O35393 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms