Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Hdac1O09106 Gm24589-201ENSMUST00000116692 94 ntBASIC17.3■□□□□ 0.36
Hdac1O09106 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Hdac1O09106 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hdac1O09106 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac1O09106 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.29■□□□□ 0.36
Hdac1O09106 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hdac1O09106 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac1O09106 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.29■□□□□ 0.36
Hdac1O09106 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac1O09106 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac1O09106 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac1O09106 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.29■□□□□ 0.36
Hdac1O09106 Gm10060-201ENSMUST00000212002 111 ntBASIC17.29■□□□□ 0.36
Hdac1O09106 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.29■□□□□ 0.36
Hdac1O09106 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Hdac1O09106 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
Hdac1O09106 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Hdac1O09106 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hdac1O09106 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.28■□□□□ 0.36
Hdac1O09106 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.28■□□□□ 0.36
Hdac1O09106 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hdac1O09106 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hdac1O09106 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.28■□□□□ 0.36
Hdac1O09106 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Gm9182-201ENSMUST00000217829 639 ntBASIC17.28■□□□□ 0.36
Hdac1O09106 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Hdac1O09106 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hdac1O09106 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC17.27■□□□□ 0.36
Hdac1O09106 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.27■□□□□ 0.36
Hdac1O09106 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hdac1O09106 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Gm16198-201ENSMUST00000118766 670 ntBASIC17.27■□□□□ 0.36
Hdac1O09106 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms