Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shisa8J3QNX5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Shisa8J3QNX5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shisa8J3QNX5 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms