Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Gm13689-201ENSMUST00000119360 685 ntBASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Gm8598-201ENSMUST00000221184 836 ntBASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Gm21038-201ENSMUST00000222205 1383 ntBASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcf11G3X9Z4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Gm18062-201ENSMUST00000208020 547 ntBASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Gm18055-201ENSMUST00000208254 547 ntBASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcf11G3X9Z4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcf11G3X9Z4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 AC156560.2-201ENSMUST00000221232 264 ntBASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcf11G3X9Z4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm4984-201ENSMUST00000115987 360 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 AC149294.4-201ENSMUST00000227870 882 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms