Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm8062-201ENSMUST00000139696 444 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm6244-201ENSMUST00000178732 841 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm45784-201ENSMUST00000188360 142 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NpcdF8VQB8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.44■□□□□ 0.38
NpcdF8VQB8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.43■□□□□ 0.38
NpcdF8VQB8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gm45098-201ENSMUST00000207179 657 ntBASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.43■□□□□ 0.38
NpcdF8VQB8 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.43■□□□□ 0.38
NpcdF8VQB8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.43■□□□□ 0.38
NpcdF8VQB8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NpcdF8VQB8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.42■□□□□ 0.38
NpcdF8VQB8 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.42■□□□□ 0.38
NpcdF8VQB8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NpcdF8VQB8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NpcdF8VQB8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms