Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm13689-201ENSMUST00000119360 685 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm5370-201ENSMUST00000187187 574 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm18027-201ENSMUST00000218947 619 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.63□□□□□ -0.23
Colca2F8VPY8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Colca2F8VPY8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm13385-201ENSMUST00000121089 220 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm24644-201ENSMUST00000157114 139 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.62□□□□□ -0.23
Colca2F8VPY8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Colca2F8VPY8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Prob1-201ENSMUST00000097619 3021 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm15371-201ENSMUST00000117057 784 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm24420-201ENSMUST00000176676 59 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm27772-201ENSMUST00000184900 187 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm38671-201ENSMUST00000200573 130 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm40466-201ENSMUST00000212174 422 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms