Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm43125-201ENSMUST00000201724 730 ntBASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cpsf4lE9Q2N0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gm14042-201ENSMUST00000120139 833 ntBASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cpsf4lE9Q2N0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms