Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gm16215-201ENSMUST00000161990 637 ntBASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gm27631-201ENSMUST00000184163 466 ntBASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Srp54bE9PXC0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gm15653-201ENSMUST00000119247 907 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gm37230-201ENSMUST00000194491 818 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gm46209-201ENSMUST00000217912 553 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gm16476-201ENSMUST00000221544 139 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Dupd1-202ENSMUST00000224735 548 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Syt7-204ENSMUST00000223586 1344 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Srp54bE9PXC0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 BC037039-201ENSMUST00000192003 2205 ntBASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Srp54bE9PXC0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms