Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gm44450-201ENSMUST00000199528 114 ntBASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gm20049-201ENSMUST00000219950 730 ntBASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx6-2D3Z4R4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Gm37179-201ENSMUST00000194862 823 ntBASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Gm18421-201ENSMUST00000204122 625 ntBASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx6-2D3Z4R4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Gm29707-201ENSMUST00000196325 491 ntBASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-2D3Z4R4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms