Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.93■□□□□ 0.14
Trim30cD3YVI9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trim30cD3YVI9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim30cD3YVI9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Gm15823-201ENSMUST00000064305 670 ntBASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim30cD3YVI9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Gm5264-201ENSMUST00000190584 848 ntBASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim30cD3YVI9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms