Protein–RNA interactions for Protein: A2A935

Prdm16, PR domain zinc finger protein 16, mousemouse

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm16A2A935 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC20.74■□□□□ 0.91
Prdm16A2A935 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prdm16A2A935 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Prdm16A2A935 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prdm16A2A935 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Prdm16A2A935 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm14660-201ENSMUST00000119809 575 ntBASIC20.72■□□□□ 0.91
Prdm16A2A935 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm8652-201ENSMUST00000181363 964 ntBASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.72■□□□□ 0.91
Prdm16A2A935 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Prdm16A2A935 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Gm8775-201ENSMUST00000170943 1327 ntBASIC20.72■□□□□ 0.91
Prdm16A2A935 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Prdm16A2A935 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prdm16A2A935 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.71■□□□□ 0.91
Prdm16A2A935 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Gm10012-201ENSMUST00000078252 192 ntBASIC20.71■□□□□ 0.91
Prdm16A2A935 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prdm16A2A935 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC20.71■□□□□ 0.91
Prdm16A2A935 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm27772-201ENSMUST00000184900 187 ntBASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm29127-201ENSMUST00000188304 517 ntBASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm37424-201ENSMUST00000191727 561 ntBASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm45331-201ENSMUST00000209868 554 ntBASIC20.7■□□□□ 0.9
Prdm16A2A935 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 AC114543.1-201ENSMUST00000226451 1558 ntBASIC20.7■□□□□ 0.9
Prdm16A2A935 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Prdm16A2A935 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prdm16A2A935 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm16A2A935 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Prdm16A2A935 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm16A2A935 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.69■□□□□ 0.9
Prdm16A2A935 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prdm16A2A935 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms