Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.39■□□□□ 0.38
Cfap99A0A140LIX9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cfap99A0A140LIX9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cfap99A0A140LIX9 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.39■□□□□ 0.38
Cfap99A0A140LIX9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cfap99A0A140LIX9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Gm6888-201ENSMUST00000221983 706 ntBASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap99A0A140LIX9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Gm25144-201ENSMUST00000179561 110 ntBASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Gm25352-201ENSMUST00000179815 110 ntBASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Gm38294-201ENSMUST00000192831 381 ntBASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap99A0A140LIX9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap99A0A140LIX9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Gm15483-201ENSMUST00000120338 456 ntBASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Gm43767-201ENSMUST00000198933 381 ntBASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cfap99A0A140LIX9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms