Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm4535-201ENSMUST00000182274 558 ntBASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm10355-201ENSMUST00000097146 517 ntBASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav13d-4A0A0G2JFX3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm13418-201ENSMUST00000119097 944 ntBASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav13d-4A0A0G2JFX3 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms