Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mir6982-201ENSMUST00000184354 68 ntBASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm44454-201ENSMUST00000198541 138 ntBASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.03□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms