Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
BC053393A0A0B4J1F6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm43767-201ENSMUST00000198933 381 ntBASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
BC053393A0A0B4J1F6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
BC053393A0A0B4J1F6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm15173-201ENSMUST00000122049 433 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm10499-201ENSMUST00000174094 934 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm17971-201ENSMUST00000190239 806 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
BC053393A0A0B4J1F6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms